Radniecki, CQLS et al - 06/29/2022
Evaluation of a Wastewater-Based Epidemiological Approach to Estimate the Prevalence of SARS-CoV-2 Infections and the Detection of Viral Variants in Disparate Oregon Communities at City and Neighborhood Scales
CQLS et al - 04/22/2022
Detection of SARS-CoV-2 B.1.351 (Beta) Variant through Wastewater Surveillance before Case Detection in a Community, Oregon, USA
Interim Director Announced - Dr. Kathryn A. Higley - 12/01/2021
Dr. Kathryn A. Higley has been selected to serve as the Interim Director of the Center for Quantitative Life Sciences (CQLS) effective December 1
Steve Strauss et al - 04/30/2020
Extensive transcriptome changes during seasonal leaf senescence in field-grown black cottonwood (Populus trichocarpa Nisqually-1)
Steve Strauss et al - 04/20/2020
Extensive transcriptome changes during seasonal leaf senescence in field-grown black cottonwood (Populus trichocarpa Nisqually-1)
Tom Sharpton et al - 04/20/2020
Bighorn sheep gut microbiomes associate with genetic and spatial structure across a metapopulation
Kronmiller et al - 04/20/2020
Transcriptome analysis of responses in Brachypodium distachyon overexpressing the BdbZIP26 transcription factor
Ryan Mehl et al - 04/09/2020
Access To Faster Eukaryotic Cell Labeling With Encoded Tetrazine Amino Acids
Denise Hynes et al - 04/09/2020
Comparing VA and Community-Based Care: Trends in Sleep Studies Following the Veterans Choice Act
John Fowler et al - 04/01/2020
High expression in maize pollen correlates with genetic contributions to pollen fitness as well as with coordinated transcription from neighboring transposable elements
Jerri Bartholomew et al - 03/24/2020
The invertebrate host of salmonid fish parasites Ceratonova shasta and Parvicapsula minibicornis (Cnidaria: Myxozoa), is a novel fabriciid annelid, Manayunkia occidentalis sp. nov. (Sabellida: Fabriciidae)
Martin Schuster et al - 03/24/2020
Cooperation and Cheating through a Secreted Aminopeptidase in the Pseudomonas aeruginosa RpoS Response
Virginia Weis et al - 03/16/2020
Host and Symbiont Cell Cycle Coordination Is Mediated by Symbiotic State, Nutrition, and Partner Identity in a Model Cnidarian-Dinoflagellate Symbiosis
Jerri Bartholomew et al - 03/13/2020
A cnidarian parasite of salmon (Myxozoa: Henneguya) lacks a mitochondrial genome
Niklaus Grünwald et al - 02/27/2020
Population Diversity and Structure of Podosphaera macularis in the Pacific Northwestern U.S. and Other Populations
Niklaus Grünwald et al - 02/25/2020
First report of the NA2 clonal lineage of Phytophthora ramorum in Indiana
Rebecca Vega Thurber et al - 02/14/2020
Parrotfish predation drives distinct microbial communities in reef-building corals
Felipe Barreto et al - 02/04/2020
Independent losses of the Hypoxia-Inducible Factor (HIF) Pathway within Crustacea
Stephen Giovannoni et al - 01/28/2020
Different carboxyl-rich alicyclic molecules proxy compounds select distinct bacterioplankton for oxidation of dissolved organic matter in the mesopelagic Sargasso Sea
Niklaus Grünwald et al - 01/28/2020
The composition of the fungal and oomycete microbiome of Rhododendron roots under varying growth conditions, nurseries, and cultivars
Ryan Mueller et al - 01/23/2020
Winter river plumes shape community composition and activity of heterotrophic microorganisms on the Oregon Coast
Jerri Bartholomew et al - 01/21/2020
Myxobolus spp. (Cnidaria: Myxozoa) in introduced yellow perch Perca flavescens (Mitchill, 1814)
Jerri Bartholomew et al - 01/14/2020
Validation of environmental DNA sampling for determination of Ceratonova shasta (Cnidaria: Myxozoa) distribution in Plumas National Forest, CA
Dee Denver et al - 01/14/2020
Mitochondrial DNA Variation and Selfish Propagation Following Experimental Bottlenecking in Two Distantly Related Caenorhabditis briggsae Isolates
Rick Colwell et al - 12/19/2019
Microbial communities from Arctic marine sediments respond slowly to methane addition during ex situ enrichments
Taal Levi et al - 12/16/2019
Environmental DNA facilitates accurate, inexpensive, and multi‐year population estimates of millions of anadromous fish
Jeff Chang et al - 12/10/2019
Effector loading onto the VgrG carrier activates type VI secretion system assembly
Hong Liu, et al - 12/09/2019
Microbial Community Predicts Functional Stability of Microbial Fuel Cells
Kelly Vining et al - 12/06/2019
Transcriptome profiling of resistance response to Meloidogyne chitwoodi introgressed from wild species Solanum bulbocastanum into cultivated potato
Rebecca Vega Thurber et al - 11/19/2019
Different nitrogen sources speed recovery from corallivory and uniquely alter the microbiome of a reef-building coral
Aymeric Goyer et al. - 11/18/2019
Expression Levels of the y-Glutamyl Hydrolase I Gene Predict Vitamin B9 Content in Potato Tubers
Jeff Chang et al - 11/08/2019
Plant-Pathogenic Agrobacterium tumefaciens Strains Have Diverse Type VI Effector-Immunity Pairs and Vary in In-Planta Competitiveness
Theo Dreher, Ryan Mueller, et al - 11/04/2019
Anabaena/Dolichospermum as the source of lethal microcystin levels responsible for a large cattle toxicosis event
F. Andrew Jones, et al - 10/25/2019
Co-occurring Fungal Functional Groups Respond Differently to Tree Neighborhoods and Soil Properties Across Three Tropical Rainforests in Panama
Massimo Bionaz, David Hendrix et al - 10/15/2019
miRWoods: Enhanced precursor detection and stacked random forests for the sensitive detection of microRNAs
Jeff Chang, Jeff Anderson, et al - 10/15/2019
Re-evaluation of a Tn5::gacA mutant of Pseudomonas syringae pv. tomato DC3000 uncovers roles for uvrC and anmK in promoting virulence
Aaron Liston, et al - 10/11/2019
A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae
Robyn L. Tanguay & Colin P. Johnson et al - 10/08/2019
Otoferlin Depletion Results in Abnormal Synaptic Ribbons and Altered Intracellular Calcium Levels in Zebrafish
Ed Davis, Jeff Chang, Joyce Loper, et al - 10/08/2019
Genomic and metabolic differences between Pseudomonas putida populations inhabiting sugarcane rhizosphere or bulk soil
Bartholomew, Jerri et al - 10/01/2019
Myxozoan Adhesion and Virulence: Ceratonova shasta on the Move
Rockey, Daniel D et al - 09/16/2019
Chromosomal recombination targets in Chlamydia interspecies lateral gene transfer
Rockey, Daniel D et al - 09/16/2019
Development of transposon mutagenesis for Chlamydia muridarum
Andrew R. Blaustein, et al - 09/10/2019
Host age alters amphibian susceptibility to Batrachochytrium dendrobatidis, an emerging infectious fungal pathogen
Sarker, Mahfuzur et al - 09/09/2019
The serine proteases CspA and CspC are essential for germination of spores of Clostridium perfringens SM101 through activating SleC and cortex hydrolysis
Jump, Donald et al - 08/26/2019
Supplementing calcium salts of soybean oil to beef steers early in life to enhance carcass development and quality
Rebecca Vega Thurber, et. al - 08/12/2019
Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov
Hendrix, Nonogaki, et al, - 08/05/2019
DELAY OF GERMINATION1‐LIKE4 acts as an inducer of seed reserve accumulation
Hynes, et al - 07/30/2019
Integrating a Medical Home in an Outpatient Dialysis Setting: Effects on Health-Related Quality of Life
Eida, Agugrain, Brumsted, Mahmud - 07/15/2019
Glycosylation of acyl carrier protein-bound polyketides during pactamycin biosynthesis
Huang, Hendrix, Mathews, et al. - 07/05/2019
LinearFold: linear-time approximate RNA folding by 5'-to-3' dynamic programming and beam search
Haendel, et al. - 06/27/2019
Enabling global clinical collaborations on identifiable patient data: The Minerva Initiative
Vining and Grünwald Labs - 06/27/2019
Genetic Diversity of Verticillium dahliae Isolates from Mint Detected with Genotyping by Sequencing
Tilton, Chang, et al. - 06/27/2019
Comparative mechanisms of PAH toxicity by benzo[a]pyrene and dibenzo[def,p]chrysene in primary human bronchial epithelial cells cultured at air-liquid interface
Liu, Ahn, et al. - 06/25/2019
Transcriptional comparison between pheromone gland-ovipositor and tarsi in the corn earworm moth Helicoverpa zea
Liston, et al. - 06/15/2019
NGS-Indel Coder: A pipeline to code indel characters in phylogenomic data with an example of its application in milkweeds (Asclepias)
Grünwald Lab - 06/14/2019
Genotyping-by-Sequencing Reveals Fine-Scale Population Differentiation in Populations of Pseudoperonospora humuli
Hynes, et al. - 06/11/2019
Diffusion, implementation, and use of Research Electronic Data Capture (REDCap) in the Veterans Health Administration (VA)
Haendel Lab - 05/29/2019
Ontology-based data integration for advancing toxicological knowledge
Tanguay Lab - 05/29/2019
Glucocorticoid receptor-dependent induction of cripto-1 (one-eyed pinhead) inhibits zebrafish caudal fin regeneration
Dombrowski, Kronmiller, et al. - 05/28/2019
Transcriptome analysis of the model grass Lolium temulentum exposed to green leaf volatiles
Tyler Lab - 05/24/2019
Small RNAs generated by bidirectional transcription mediate silencing of RXLR effector genes in the oomycete Phytophthora sojae
Haendel Lab - 05/24/2019
New models for human disease from the International Mouse Phenotyping Consortium
Barreto Lab - 05/21/2019
Loss of the HIF pathway in a widely distributed intertidal crustacean, the copepod Tigriopus californicus
Bionaz Lab - 05/17/2019
2,4-Thiazolidinedione in Well-Fed Lactating Dairy Goats: I. Effect on Adiposity and Milk Fat Synthesis
Thurber Lab - 05/02/2019
Multiple stressors interact primarily through antagonism to drive changes in the coral microbiome
Levi, Linnell, Eriksson, et al. - 05/01/2019
Biotic factors influencing the unexpected distribution of a Humboldt marten (Martes caurina humboldtensis) population in a young coastal forest
Tyler Lab - 04/26/2019
Tethering of Multi-vesicular Bodies and the Tonoplast to the Plasma Membrane in Plants
Tyler Lab - 04/26/2019
Manipulating Endoplasmic Reticulum-Plasma Membrane Tethering in Plants through Fluorescent Protein Complementation
Tyler Lab - 04/24/2019
Infection mechanisms and putative effector repertoire of the mosquito pathogenic oomycete Pythium guiyangense uncovered by genomic analysis
Liston Lab - 04/18/2019
A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae
O'Malley Lab - 04/15/2019
A quantitative genetic analysis of life-history traits and lifetime reproductive success in reintroduced Chinook salmon
Bartholomew Lab - 04/11/2019
Development and application of a qPCR assay targeting Ichthyophthirius multifiliis in environmental water samples
Luis Sayavedra-Soto, et al. - 04/11/2019
A Physiological and Genomic Comparison of Nitrosomonas Cluster 6a and 7 Ammonia-Oxidizing Bacteria
Leid Lab - 04/09/2019
A de novo substitution in BCL11B leads to loss of interaction with transcriptional complexes and craniosynostosis
Haendel Lab - 04/08/2019
The Pediatric Cell Atlas: Defining the Growth Phase of Human Development at Single-Cell Resolution
Thurber Lab - 04/08/2019
Draft Genome Sequence of Phocine Herpesvirus 1 Isolated from the Brain of a Harbor Seal
Haendel Lab - 04/08/2019
uPheno 2: Framework for standardised representation of phenotypes across species
Haendel Lab - 03/27/2019
An analysis and metric of reusable data licensing practices for biomedical resources
Kolluri and Tanguay Labs - 03/16/2019
Improved in vivo targeting of BCL-2 phenotypic conversion through hollow gold nanoshell delivery
Tyler and Grunwald Labs - 03/12/2019
Mitotic Recombination and Rapid Genome Evolution in the Invasive Forest Pathogen Phytophthora ramorum
College of Agriculture Sciences - 03/11/2019
Fungi Associated with and Influence of Moisture on Development of Kernel Mold of Hazelnut
Sikora Lab - 03/07/2019
Neisseria gonorrhoeae MlaA influences gonococcal virulence and membrane vesicle production
Hayes and Vining Labs - 02/11/2019
Introgression of rpg4/Rpg5 into barley germplasm provides insights into the genetics of resistance to Puccinia graminis f. sp. tritici race TTKSK and resources for developing resistant cultivars
Lohr, Morgun and Shulzhenko Labs - 02/11/2019
Effect of temperature and time on the thanatomicrobiome of the cecum, ileum, kidney, and lung of domestic rabbits
Sharpton Lab - 01/24/2019
A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiome’s link to Pseudocapillaria tomentosa infection and pathology
Tilton and Williams Labs - 01/23/2019
Toxicokinetics of benzo[a]pyrene in humans: Extensive metabolism as determined by UPLC-accelerator mass spectrometry following oral micro-dosing
Jones Lab - 01/18/2019
Genomic resources for the Neotropical tree genus Cedrela (Meliaceae) and its relatives
Kolluri Lab - 01/05/2019
Cancer therapeutics based on BCL-2 functional conversion
Dreher and Mueller Labs - 01/02/2019
Anabaena/Dolichospermum as the source of lethal microcystin levels responsible for a large cattle toxicosis event
Philmus Lab - 12/11/2018
Assessment and verification of commercially available pressure cookers for laboratory sterilization
Dolja Lab - 11/12/2018
Metagenomic analysis of Riesling grapevine reveals complex virome including two new and divergent variants of Grapevine leafroll-associated virus 3
Tanguay & Greenwood Labs - 10/30/2018
Quantification of glioblastoma progression in zebrafish xenografts: Adhesion to laminin alpha 5 promotes glioblastoma microtumor formation and inhibits cell invasion
Tyler Lab - 10/22/2018
A Phytophthora effector recruits a host cytoplasmic transacetylase into nuclear speckles to enhance plant susceptibility
Haendel Lab - 10/11/2018
Classification, Ontology, and Precision Medicine
Cowen Lab & CGRB - 10/01/2018
How edge computing transformed marine biology research at Oregon State University
Shulzhenko & Morgun Labs - 09/19/2018
CVID enteropathy is characterized by exceeding low mucosal iga levels and interferon-driven inflammation possibly related to the presence of a pathobiont
Grunwald and Chang Labs - 09/04/2018
Evolution of the U.S. Biological Select Agent Rathayibacter toxicus
Bartholomew Lab - 08/29/2018
WIDESPREAD DISTRIBUTION OF CERATONOVA SHASTA (CNIDARIA:MYXOSPOREA) GENOTYPES INDICATES BOTH EVOLUTIONARY ADAPTATION TO ITS SALMONID FISH HOSTS
Dana Gibbon - CGRB's Bioinformatics Analyst - 08/09/2018
Schizosaccharomyces pombe Pol II transcription elongation factor ELL functions as part of a rudimentary super elongation complex
Maddison Lab - 07/27/2018
Phylogenetic relationships and convergent evolution of ocean‐shore ground beetles (Coleoptera: Carabidae: Trechinae: Bembidion and relatives)
Megraw Lab - 07/25/2018
NanoCAGE-XL: An Approach to High-Confidence Transcription Start Site Sequencing
Chang & Loper Labs - 07/22/2018
Genome variations between rhizosphere and bulk soil ecotypes of a Pseudomonas koreensis population
Tyler Lab - 07/13/2018
Mutations in ORP1 conferring oxathiapiprolin resistance confirmed by genome editing using CRISPR/Cas9 in Phytophthora capsici and P. sojae
Chang Lab - 07/11/2018
The Agrobacterium Type VI Secretion System: A Contractile Nanomachine for Interbacterial Competition
Dreher Lab - 06/29/2018
A closely-related clade of globally distributed bloom-forming cyanobacteria within the Nostocales
Tanguay Lab - 06/29/2018
Elucidating Gene-by-Environment Interactions Associated with Differential Susceptibility to Chemical Exposure
Megraw Lab - 06/27/2018
Identification of transcription factors from NF-Y, NAC, and SPL families responding to osmotic stress in multiple tomato varieties
Bionaz Lab - 06/26/2018
Peroxisome proliferator-activated receptor β/δ does not regulate glucose uptake and lactose synthesis in bovine mammary epithelial cells cultivated in vitro
Vining Lab - 06/19/2018
Characterization of aphid resistance loci in black raspberry (Rubus occidentalis L.)
Tanguay & Kolluri Labs - 06/11/2018
Induction of apoptosis and suppression of tumor growth by Nur77-derived Bcl-2 converting peptide in chemoresistant lung cancer cells
Philmus, Sikora, & McPhail Labs - 05/29/2018
Jizanpeptins, Cyanobacterial Protease Inhibitors from a Symploca sp. Cyanobacterium Collected in the Red Sea
Hendrix Lab - 05/09/2018
bpRNA: large-scale automated annotation and analysis of RNA secondary structure
Chang and Grunwald Labs - 05/08/2018
Response to comments on “Evolutionary transitions between beneficial and phytopathogenic Rhodococcus challenge disease management”
Chang Lab - 05/04/2018
Differential suppression of Nicotiana benthamiana innate immune responses by transiently expressed Pseudomonas syringae type III effectors
Dolja & Fowler Labs - 05/02/2018
A Broadly-Conserved NERD Genetically Interacts with the Exocyst to Affect Root Growth and Cell Expansion
Jaiswal Lab - 04/30/2018
Abiotic Stresses Modulate Landscape of Poplar Transcriptome via Alternative Splicing, Differential Intron Retention, and Isoform Ratio Switching
Liston Lab & B. Kronmiller - 04/23/2018
Reconciling Conflicting Phylogenies in the Origin of Sweet Potato and Dispersal to Polynesia
Bartholomew Lab - 03/27/2018
Genotyping of individual Ceratonova shasta (Cnidaria: Myxosporea) myxospores reveals intra-spore ITS-1 variation and invalidates the distinction of genotypes II and III
Grunwald Lab - 03/13/2018
Correction: Evolutionary transitions between beneficial and phytopathogenic Rhodococcus challenge disease management
Tyler Lab - 03/09/2018
Oxysterol-binding protein-related protein 2 is not essential for Phytophthora sojae based on CRISPR/Cas9 deletions
Blouin Lab - 03/05/2018
Family influence on length at release and size-biased survival post release in hatchery-reared steelhead: A mechanism to explain how genetic adaptation to captivity occurs
Tanguay Lab - 03/01/2018
AHR2 required for normal behavioral responses and proper development of the skeletal and reproductive systems in zebrafish
Liston Lab - 02/26/2018
Evolution of pyrrolizidine alkaloid biosynthesis in Apocynaceae: revisiting the defence de-escalation hypothesis
Grunwald Lab - 02/22/2018
Variation in genetic diversity of Phytophthora infestans populations in Mexico from the center of origin outwards
Grunwald Lab - 02/22/2018
Populations of Phytophthora rubi show little differentiation and high rates of migration among states in the Western United States
Dolja Lab - 02/10/2018
Metaviromics: a tectonic shift in understanding virus evolution
Tanguay Lab - 01/24/2018
Population genetic diversity in zebrafish lines
Bartholomew Lab - 01/17/2018
Ceratomyxa gracillima n. sp. (Cnidaria: Myxosporea) provides evidence of panmixia and ceratomyxid radiation in the Amazon basin
Weis Lab - 12/09/2017
Phylogenetic characterization of transporter proteins in the cnidarian-dinoflagellate symbiosis
Tanguay & Kolluri Labs - 12/01/2017
Identification of a Raloxifene Analog That Promotes AhR-Mediated Apoptosis in Cancer Cells
Jaiswal Lab - 11/23/2017
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics
Bethan Jones, CGRB Lab - 11/14/2017
Novel incubation-free approaches to determine phytoplankton net primary productivity, growth, and biomass based on flow cytometry and quantification of ATP and NAD(H)
Tyler Lab - 11/13/2017
Conserved RxLR effectors from oomycetes Hyaloperonospora arabidopsidis and Phytophthora sojae suppress PAMP- and effector-triggered immunity in diverse plants
Dolja Lab - 11/07/2017
Metagenomics reshapes the concepts of RNA virus evolution by revealing extensive horizontal virus transfer
Beckman Lab - 10/19/2017
Evidence for mast cells contributing to neuromuscular pathology in an inherited model of ALS
Häse & Mueller Labs - 10/17/2017
Three Draft Genome Sequences of Vibrio coralliilyticus Strains Isolated from Bivalve Hatcheries
Bartholomew Lab - 10/14/2017
Morphological and molecular description of Myxobolus batalhensis...
Chang & Loper Labs - 10/13/2017
Tropical soils are a reservoir for fluorescent Pseudomonas spp. biodiversity
Liston Lab - 09/28/2017
Genetic mapping and phylogenetic analysis reveal intraspecific variation in sex chromosomes of the Virginian strawberry
Wolpert Lab - 09/25/2017
Reassessing apoptosis in plants
Hendrix Lab - 09/11/2017
Transcriptomics of nine-cis-epoxycarotenoid dioxygenase 6 induction in imbibed seeds reveals feedback mechanisms and long non-coding RNAs
Tanguay & Ho Labs - 08/24/2017
Combinatorial effects of zinc deficiency and arsenic exposure on zebrafish (Danio rerio) development
Liston Lab - 08/04/2017
Evaluating allopolyploid origins in strawberries (Fragaria) using haplotypes generated from target capture sequencing
Liston Lab - 08/03/2017
Present-day sympatry belies the evolutionary origin of a high-order polyploid
Dreher Lab - 07/20/2017
The Molecular Ecology of Microcystis sp. Blooms in the San Francisco Estuary Delta
Bionaz Lab - 06/27/2017
2,4-Thiazolidinedione Treatment Improves the Innate Immune Response in Dairy Goats with Induced Subclinical Mastitis
Freitag Lab - 06/27/2017
Translation Initiation from Conserved Non-AUG Codons Provides Additional Layers of Regulation and Coding Capacity
Filichkin/Megraw Labs - 06/17/2017
DNase I SIM: A Simplified In-Nucleus Method for DNase I Hypersensitive Site Sequencing
Chang Lab - 06/06/2017
Isothermal amplification and lateral flow assay for detecting crown gall-causing Agrobacterium spp.
Vega-Thurber Lab - 05/31/2017
Alien vs. predator: bacterial challenge alters coral microbiomes unless controlled by Halobacteriovorax predators
Giovannoni Lab - 05/31/2017
Biological cycling of volatile organic carbon by phytoplankton and bacterioplankton
Chang/Bottomley Labs - 05/05/2017
Draft Genome Sequence of Nitrobacter vulgaris Strain Ab1, a Nitrite-Oxidizing Bacterium
Tyler Lab - 05/04/2017
The fog of war: How network buffering protects plants’ defense secrets from pathogens
Tyler Lab - 04/27/2017
Identification and characterization of simple sequence repeats (SSRs) for population studies of Puccinia novopanici
Jones Lab - 04/16/2017
The role of soil chemistry and plant neighbourhoods in structuring fungal communities in three Panamanian rainforests
Kolluri Lab - 03/09/2017
The Aryl hydrocarbon receptor is required for induction of p21cip1/waf1 expression and growth inhibition by SU5416 in hepatoma cells
Giebultowicz & Hendrix Labs - 02/22/2017
The Scientist article: An Aging-Related Effect on the Circadian Clock
Giebultowicz & Hendrix Labs - 02/21/2017
Circadian deep sequencing reveals stress-response genes that adopt robust rhythmic expression during aging
Tanguay & Ho Labs - 02/20/2017
Adverse effects of parental zinc deficiency on metal homeostasis and embryonic development in a zebrafish model
Tyler Lab - 02/18/2017
Nuclear localization of a putative Phytophthora sojaebZIP1 transcription factor is mediated by multiple targeting motifs
Weis Lab - 02/16/2017
The sphingosine rheostat is involved in the cnidarian heat stress response but not necessarily in bleaching
Maddison Lab - 02/15/2017
Sequencing historical specimens: successful preparation of small specimens with low amounts of degraded DNA
Tyler Lab - 02/10/2017
Phytophthora megakarya and P. palmivora, closely related causal agents of cacao black pod rot, underwent increases in genome sizes and gene numbers by different mechanisms
Dreher Lab - 01/19/2017
Towards long-read metagenomics: complete assembly of three novel genomes from bacteria dependent on a diazotrophic cyanobacterium in a freshwater lake co-culture
Weis & Blaustein Labs - 01/17/2017
Linking Ecology and Epidemiology to Understand Predictors of Multi-Host Responses to an Emerging Pathogen, the Amphibian Chytrid Fungus
Sharpton Lab - 01/13/2017
Increasing dietary nitrate has no effect on cancellous bone loss or fecal microbiome in ovariectomized rats
Chang/Dashwood/Hendrix/Ho Labs - 01/12/2017
Long non-coding RNAs and sulforaphane: a target for chemoprevention and suppression of prostate cancer
Tyler Lab - 01/12/2017
A paralogous decoy protects Phytophthora sojae apoplastic effector PsXEG1 from a host inhibitor
Tyler Lab - 01/03/2017
Distinctive Nuclear Localization Signals in the Oomycete Phytophthora sojae
Ramsey Lab - 01/03/2017
Cross-Species Analysis of the Canine and Human Bladder Cancer Transcriptome and Exome
Vega-Thurber Lab - 12/27/2016
Effects of predation and nutrient enrichment on the success and microbiome of a foundational coral
Dolja Lab - 12/21/2016
Arabidopsis Myosins XI1, XI2, and XIK Are Crucial for Gravity-Induced Bending of Inflorescence Stems
Dolja Lab - 12/15/2016
Myosin-driven transport network in plants
Bermudez Lab - 12/06/2016
Identification of Bicarbonate as a Trigger and Genes Involved with Extracellular DNA Export in Mycobacterial Biofilms
Vining Lab - 11/17/2016
Draft Genome Sequence of Mentha longifolia (L.) and Development of Resources for Mint Cultivar Improvement
Weis Lab - 11/15/2016
The scavenger receptor repertoire in six cnidarian species and its putative role in cnidarian-dinoflagellate symbiosis.
Morgun & Shulzhenko Labs - 11/14/2016
Akkermansia muciniphila mediates negative effects of IFNγ on glucose metabolism
Freitag Lab - 11/11/2016
Profiling Changes in Histone Post-translational Modifications by Top-Down Mass Spectrometry
Levi Lab - 11/09/2016
Environmental DNA from Residual Saliva for Efficient Noninvasive Genetic Monitoring of Brown Bears (Ursus arctos)
Jaiswal Lab - 10/31/2016
Plant Reactome: a resource for plant pathways and comparative analysis
Tyler Lab - 10/27/2016
EuMicrobedbLite: A lightweight genomic resource and analytic platform for draft oomycete genomes
Hagen Lab - 10/26/2016
N-acetylcysteine may help prevent age related health problems
Bottomley Lab - 10/25/2016
Quorum Quenching of Nitrobacter winogradskyi Suggests that Quorum Sensing Regulates Fluxes of Nitrogen Oxide(s) during Nitrification
Ramsey Lab - 10/24/2016
A Computational Systems Biology Approach for Identifying Candidate Drugs for Repositioning for Cardiovascular Disease
Maddison Lab - 10/20/2016
The rapidly changing landscape of insect phylogenetics
Chang Lab - 10/12/2016
A Covert Operation by a Plant Pathogen
Tyler Lab - 09/30/2016
Comparative Genomic Analysis among Four Representative Isolates of Phytophthora sojae Reveals Genes under Evolutionary Selection
Spatafora Lab - 09/07/2016
Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum
Dreher Lab - 08/22/2016
Elucidation of Taste- and Odor-Producing Bacteria and Toxigenic Cyanobacteria in a Midwestern Drinking Water Supply Reservoir by Shotgun Metagenomic Analysis
Denver Lab - 08/04/2016
Genome Skimming: A Rapid Approach to Gaining Diverse Biological Insights into Multicellular Pathogens
Pastey Lab - 08/02/2016
Rapid Detection of Cyprinid Herpesvirus 3 in Latently Infected Koi by Recombinase Polymerase Amplification
Blouin Lab - 07/16/2016
Spawn date explains variation in growth rate among families of hatchery reared Hood River steelhead (Oncorhynchus mykiss)
Johnson Lab - 07/08/2016
Dysferlin Binds SNAREs (Soluble N-Ethylmaleimide-sensitive Factor (NSF) Attachment Protein Receptors) and Stimulates Membrane Fusion in a Calcium-sensitive Manner
Grünwald Lab - 07/05/2016
Genomic analyses of dominant US clonal lineages of Phytophthora infestans reveals a shared common ancestry for clonal lineages US11 and US18 and a lack of recently shared ancestry...
Freitag Lab - 06/27/2016
Knock-down of the methyltransferase Kmt6 relieves H3K27me3 and results in induction of cryptic and otherwise silent secondary metabolite gene clusters in Fusarium fujikuroi
Mueller & Dreher Labs - 06/13/2016
Structural and functional analysis of the finished genome of the recently isolated toxic Anabaena sp. WA102
Vega-Thurber Lab - 06/07/2016
Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales
Tyler Lab - 06/03/2016
A Phytophthora sojae effector suppresses endoplasmic reticulum stress-mediated immunity by stabilizing plant Binding immunoglobulin Proteins
Dreher Lab - 04/28/2016
An overview of diversity, occurrence, genetics and toxin production of bloom-forming Dolichospermum (Anabaena) species
Vining Lab - 03/26/2016
Construction of a SNP and SSR linkage map in autotetraploid blueberry using genotyping by sequencing
Chang & Loper Labs - 03/14/2016
Genome sequencing and transposon mutagenesis of Burkholderia seminalis strain TC3.4.2R3 identify genes contributing to suppression of orchid necrosis caused by B. gladioli
Blouin Lab - 02/17/2016
A single generation of domestication heritably alters the expression of hundreds of genes
Thurber & Vega-Thurber Labs - 01/25/2016
Viral outbreak in corals associated with an in situ bleaching event: atypical herpes-like viruses and a new megavirus infecting Symbiodinium
Loper Lab - 12/11/2015
An inter-species signaling system mediated by fusaric acid has parallel effects on antifungal metabolite production by Pseudomonas protegens Pf-5 and antibiosis of Fusarium spp.
Liston Lab - 11/18/2015
Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae)
Jaiswal Lab - 11/09/2015
The Plant Ontology: A Tool for Plant Genomics
Bracha Lab & CGRB - 11/05/2015
First Complete Genome Sequence of Felis catus Gammaherpesvirus 1
Freitag Lab - 10/01/2015
Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes
Denver Lab - 09/10/2015
Comparative genomics of a plant-parasitic nematode endosymbiont suggest a role in nutritional symbiosis
Filichkin & Megraw Labs - 09/04/2015
Improved DNase-seq protocol facilitates high resolution mapping of DNase I hypersensitive sites in roots in Arabidopsis thaliana
Chang & Loper Labs - 09/03/2015
Phloroglucinol functions as an intracellular and intercellular chemical messenger influencing gene expression in Pseudomonas protegens
Megraw Lab - 08/13/2015
NanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sites
Spatafora Lab - 08/04/2015
The genome of the truffle-parasite Tolypocladium ophioglossoides and the evolution of antifungal peptaibiotics
Tyler Lab - 07/27/2015
Enhanced resistance in Theobroma cacao against oomycete and fungal pathogens by secretion of phosphatidylinositol-3-phosphate-binding proteins
Tyler Lab - 07/14/2015
Crystal structure of the effector AvrLm4-7 of Leptosphaeria maculans reveals insights into its translocation into plant cell and recognition by resistance proteins
Tyler Lab - 07/10/2015
A Phytophthora sojae Glycoside Hydrolase 12 Protein Is a Major Virulence Factor during Soybean Infection and Is Recognized as a PAMP
Goyer & Chang Labs - 06/20/2015
RNA-Seq analysis of resistant and susceptible potato varieties during the early stages of potato virus Y infection
Adelaide Rhodes, CGRB Bioinformatics Trainer - 06/16/2015
Distribution of two species of the genus Nototanais spp. (Tanaidacea) in Winter Quarters Bay and waters adjoining McMurdo Station, McMurdo Sound, Antarctica
Jin & Rockey Labs and CGRB's Chris Sullivan - 06/16/2015
Application of a nanoflare probe specific to a latency associated transcript for isolation of KHV latently infected cells
Bakalinsky Lab - 06/09/2015
PEP3 overexpression shortens lag phase but does not alter growth rate in Saccharomyces cerevisiae exposed to acetic acid stress
Jaiswal Lab - 04/24/2015
NSF Funds Development of Common Reference Ontologies and Applications for Plant Biology
Ciuffetti Lab - 04/06/2015
Necrotrophic Effector Epistasis in the Pyrenophora tritici-repentis-Wheat Interaction
Filichkin, Megraw and Mockler Labs - 03/30/2015
Alternative splicing in plants: directing traffic at the crossroads of adaptation and environmental stress
Liston Lab publishes paper - 01/06/2015
Liston Lab utilizes high throughput technology to survey many species and individuals in the angiosperm genus Asclepias (Apocynaceae).
Fowler Lab publishes paper - 12/31/2014
Fowler Lab publishes paper in BMC Plant Biology with research that included extensive use of CGRB's confocal microscope.
OSU interdisciplinary team recieves $3million USDA grant - 12/01/2014
Jeff Chang, Niklaus Grunwald and Taifo Mahmud, are part of an interdisciplinary team that just received an NSF $3 million grant to study two groups of bacteria that result in millions of dollars in losses annually to the nation’s nursery industry.
Dolja and Karplus elected 2014 Fellows to the AAAS - 11/24/2014
Valerian Dolja, Botany & Plant Pathology, and P. Andrew Karplus, Biochemistry & Biophysics, were elected as Fellows to the American Association for the Advancement of Science.
OREGON STATE UNIVERSITY
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